Pre_GI: BLASTP Hits

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Query: NC_011004:3582078:3583642 Rhodopseudomonas palustris TIE-1, complete genome

Start: 3583642, End: 3587415, Length: 3774

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014834:2641514:2652729265272926565023774Rhodopseudomonas palustris DX-1 chromosome, complete genomeribonucleoside-diphosphate reductase02466
NC_014217:1352777:1369099136909913728243726Starkeya novella DSM 506 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent01833
NC_011757:1246000:1246305124630512500363732Methylobacterium chloromethanicum CM4, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent01822
NC_010172:1199725:1199725119972512034563732Methylobacterium extorquens PA1, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent01820
NC_013854:330543:3305433305433342953753Azospirillum sp. B510, complete genomeribonucleoside-diphosphate reductase alpha chain01579
NC_016622:170000:1702361702361739763741Azospirillum lipoferum 4B, complete genomeadenosylcobalamin-dependent ribonucleoside-diphosphate reductase01578
NC_015577:862659:8626598626598672814623Treponema azotonutricium ZAS-9 chromosome, complete genomeB12-dependent ribonucleoside diphosphate reductase01020
NC_016631:5478098:5494277549427754975403264Granulicella mallensis MP5ACTX8 chromosome, complete genomeribonucleoside-diphosphate reductase3e-89331
NC_013169:1759900:1777696177769617806532958Kytococcus sedentarius DSM 20547, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent3e-88327
NC_014830:1602198:1606940160694016098522913Intrasporangium calvum DSM 43043 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent6e-85316
NC_015064:927096:9433949433949468433450Acidobacterium sp. MP5ACTX9 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent2e-84314
NC_014008:1246642:1250387125038712533022916Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent4e-66254
NC_012622:1194347:1197776119777612002922517Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeribonucleoside-diphosphate reductase7e-30133
NC_016051:1849905:1859341185934118634264086Thermococcus sp. AM4 chromosome, complete genomeribonucleoside-diphosphate reductase, coenzyme B12-dependent2e-29132
NC_011529:1685834:1689494168949416922262733Thermococcus onnurineus NA1, complete genomeHypothetical ribonucleotide reductase alpha subunit5e-29130
NC_007494:621673:6364496364496387162268Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceRibonucleotide reductase3e-26121
NC_014973:1257625:1273561127356112757982238Geobacter sp. M18 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent5e-26120
NC_007298:1029841:1044633104463310475272895Dechloromonas aromatica RCB, complete genomeRibonucleotide reductase large subunit5e-26120
NC_019942:68031:8763087630899332304Aciduliprofundum sp. MAR08-339, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent2e-24115
NC_002689:78297:9374993749960522304Thermoplasma volcanium GSS1, complete genomeribonucleotide-diphosphate reductase alpha subunit7e-24114
NC_012918:3558500:3562426356242635646602235Geobacter sp. M21 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-23112
NC_019970:336472:3364723364723387812310Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribonucleoside-diphosphate reductase class II9e-23110
NC_016629:1175828:1197437119743711996712235Desulfovibrio africanus str. Walvis Bay chromosome, completeribonucleoside-diphosphate reductase3e-22108
NC_010814:2482848:2484505248450524867422238Geobacter lovleyi SZ, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent1e-21106
NC_010003:2056000:2066974206697420694962523Petrotoga mobilis SJ95, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent2e-21105
NC_002607:1221158:1221158122115812243133156Halobacterium sp. NRC-1, complete genomeNrdB24e-21104
NC_018664:2459994:2461358246135824636582301Clostridium acidurici 9a chromosome, complete genomeribonucleoside-diphosphate reductase NrdZ5e-20100
NC_016627:3815690:3819078381907838213752298Clostridium clariflavum DSM 19732 chromosome, complete genomeribonucleoside-diphosphate reductase class II6e-20100
NC_014253:729996:7317157317157338022088Methanohalobium evestigatum Z-7303 chromosome, complete genomeribonucleoside-diphosphate reductase2e-1999
NC_016147:2820232:2842251284225128444042154Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeribonucleoside-diphosphate reductase2e-1895.9
NC_014219:2491021:2505595250559525081622568Bacillus selenitireducens MLS10 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent2e-1895.5
NC_014804:1898419:1917408191740819205363129Thermococcus barophilus MP chromosome, complete genomeribonucleotide reductase of class II, coenzyme B12-dependent4e-1894.7
NC_000868:1562000:1570457157045715768256369Pyrococcus abyssi GE5, complete genomeribonucleotide-diphosphate reductase alpha subunit4e-1791.3
NC_014371:1358615:1366198136619813687982601Prevotella melaninogenica ATCC 25845 chromosome chromosome II,ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent1e-1689.7
NC_021150:68251:8167181671838122142Azotobacter vinelandii CA6, complete genomeribonucleotide-diphosphate reductase, adenosylcobalamin-dependent2e-1689
NC_012560:68251:8167181671838122142Azotobacter vinelandii DJ, complete genomeribonucleotide-diphosphate reductase, adenosylcobalamin-dependent2e-1689
NC_012526:520947:5404345404345434242991Deinococcus deserti VCD115, complete genomeputative ribonucleoside-diphosphate reductase4e-1688.2
NC_007356:202131:2217962217962235531758Dehalococcoides sp. CBDB1, complete genomeribonucleotide reductase6e-1687.4
NC_008095:6323456:6331039633103963333962358Myxococcus xanthus DK 1622, complete genomeribonucleoside-diphosphate reductase, alpha subunit7e-1687.4
NC_015947:223184:2273352273352297372403Burkholderia sp. JV3 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha2e-1586.3
NC_015711:8169752:8177814817781481803302517Myxococcus fulvus HW-1 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha5e-1584.3
NC_017506:1507943:1521726152172615238702145Marinobacter adhaerens HP15 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha9e-1583.6
NC_003295:199354:2161642161642180171854Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-1379
NC_018644:446102:4549164549164576542739Alpha proteobacterium HIMB59 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit5e-1274.7
NC_009921:3073287:308674930867493087282534Frankia sp. EAN1pec, complete genomeribonucleotide reductase large subunit5e-1274.3
NC_019892:1113114:1115575111557511179802406Singulisphaera acidiphila DSM 18658 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-1173.2
NC_015953:4908069:4933985493398549363962412Streptomyces sp. SirexAA-E chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha3e-1171.6
NC_005085:2457295:2471817247181724747352919Chromobacterium violaceum ATCC 12472, complete genomeribonucleotide-diphosphate reductase alpha subunit5e-1171.2
NC_006833:902744:9038129038129055961785Wolbachia endosymbiont strain TRS of Brugia malayi, completeribonucleotide-diphosphate reductase alpha subunit8e-1170.5
NC_017506:3825148:3842051384205138448162766Marinobacter adhaerens HP15 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-1069.3
NC_016002:1975000:2018411201841120212602850Pseudogulbenkiania sp. NH8B, complete genomeribonucleoside-diphosphate reductase subunit alpha4e-1068.2
NC_014221:78500:8259782597863073711Truepera radiovictrix DSM 17093 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent4e-1068.2
NC_008752:725189:7251897251897288693681Acidovorax avenae subsp. citrulli AAC00-1, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent2e-0965.9
NC_007880:935670:9553589553589571301773Francisella tularensis subsp. holarctica, complete genomeRibonucleoside-diphosphate reductase, alpha subunit4e-0964.7
NC_002977:2719774:2719774271977427237273954Methylococcus capsulatus str. Bath, complete genomeribonucleoside reductase precursor5e-0964.7
NC_019940:1309359:1311579131157913145062928Thioflavicoccus mobilis 8321 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha2e-0862.8
NC_013922:49587:7181471814760644251Natrialba magadii ATCC 43099 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent4e-0861.2
NC_013037:3994083:4005818400581840082622445Dyadobacter fermentans DSM 18053, complete genomeribonucleoside-diphosphate reductase, alpha subunit1e-0760.1
NC_016641:3711972:3711972371197237140562085Paenibacillus terrae HPL-003 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-0759.7
NC_016077:2044876:2063810206381020660922283Acidaminococcus intestini RyC-MR95 chromosome, complete genomeribonucleoside-diphosphate reductase5e-0757.8
NC_013889:1514799:1532533153253315354272895Thioalkalivibrio sp. K90mix chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit6e-0757.8
NC_019902:2372097:2389946238994623928582913Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase of class Ia (aerobic), alpha subunit8e-0757.4
NC_011420:3582500:3586930358693035887951866Rhodospirillum centenum SW, complete genomeribonucleoside-diphosphate reductase, alpha subunit2e-0655.8