Pre_GI: BLASTP Hits

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Query: NC_010816:2252732:2255789 Bifidobacterium longum DJO10A, complete genome

Start: 2255789, End: 2256439, Length: 651

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017221:441948:445676445676446326651Bifidobacterium longum subsp. longum KACC 91563 chromosome,oligoribonuclease9e-125445
NC_008578:1827605:185484318548431855652810Acidothermus cellulolyticus 11B, complete genomeExonuclease, RNase T and DNA polymerase III5e-54210
NC_008278:1876435:189109018910901891860771Frankia alni ACN14a, complete genomeOligoribonuclease4e-51201
NC_013093:1157476:117432711743271174953627Actinosynnema mirum DSM 43827, complete genomeExonuclease RNase T and DNA polymerase III2e-48192
NC_014643:1986440:199410819941081994701594Rothia dentocariosa ATCC 17931 chromosome, complete genomeoligoribonuclease4e-48191
NC_007164:622000:625885625885626517633Corynebacterium jeikeium K411, complete genomeputative oligoribonuclease1e-46186
NC_013235:1938889:195770319577031958341639Nakamurella multipartita DSM 44233, complete genomeExonuclease RNase T and DNA polymerase III8e-47186
NC_012704:1641684:166341416634141664082669Corynebacterium kroppenstedtii DSM 44385, complete genomeputative oligoribonuclease3e-46184
NC_019673:1275627:130059013005901301186597Saccharothrix espanaensis DSM 44229 complete genomeOligoribonuclease5e-46184
NC_009077:3851203:385376838537683854415648Mycobacterium sp. JLS, complete genomeExonuclease, RNase T and DNA polymerase III1e-43176
NC_017186:7822448:782712178271217827696576Amycolatopsis mediterranei S699 chromosome, complete genomeoligoribonuclease5e-40164
NC_014318:7821227:782707578270757827650576Amycolatopsis mediterranei U32 chromosome, complete genomeoligoribonuclease5e-40164
NC_009654:2958316:298244029824402982997558Marinomonas sp. MWYL1, complete genomeoligoribonuclease8e-32136
NC_016002:2453919:245391924539192454464546Pseudogulbenkiania sp. NH8B, complete genomeoligoribonuclease1e-31135
NC_015276:2804874:282282828228282823376549Marinomonas mediterranea MMB-1 chromosome, complete genomeOligoribonuclease2e-31135
NC_016513:1185241:119921911992191199767549Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeoligoribonuclease5e-31134
NC_013416:875758:889738889738890286549Aggregatibacter actinomycetemcomitans D11S-1, complete genomeoligoribonuclease5e-31134
NC_018868:3229381:323390032339003234448549Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeoligoribonuclease7e-31134
NC_012691:2614603:271925527192552719800546Tolumonas auensis DSM 9187, complete genomeExonuclease RNase T and DNA polymerase III6e-29127
NC_009465:90000:125572125572126117546Candidatus Vesicomyosocius okutanii HA, complete genomeoligoribonuclease5e-29127
NC_020541:2264521:228866122886612289227567Rhodanobacter sp. 2APBS1, complete genome5' exoribonuclease)' target='_blank' title='Search database for similar gene annotations'>oligoribonuclease (3'->5' exoribonuclease)2e-28125
NC_016632:120500:131043131043131588546Serratia symbiotica str. 'Cinara cedri' chromosome, completeoligoribonuclease3e-28125
NC_005061:65861:819328193282474543Candidatus Blochmannia floridanus, complete genomeoligoribonuclease2e-23108
NC_015696:47484:595195951960055537Francisella sp. TX077308 chromosome, complete genome3'-to-5' oligoribonuclease5e-23107
NC_020126:2405175:241216224121622412683522Myxococcus stipitatus DSM 14675, complete genomeoligoribonuclease2e-0755.8