Pre_GI: BLASTP Hits

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Query: NC_010803:1573849:1573849 Chlorobium limicola DSM 245, complete genome

Start: 1573849, End: 1576926, Length: 3078

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010424:214640:2270922270922301573066Candidatus Desulforudis audaxviator MP104C, complete genometype III restriction enzyme, res subunit01604
NC_017223:3345902:3360189336018933633083120Bordetella pertussis CS chromosome, complete genomeputative restriction endonuclease01453
NC_002929:3305682:3319969331996933230883120Bordetella pertussis Tohama I, complete genomeputative restriction endonuclease01453
NC_008786:4579490:4584085458408545871473063Verminephrobacter eiseniae EF01-2, complete genometype III restriction enzyme, res subunit01451
NC_013854:237857:2475822475822506173036Azospirillum sp. B510, complete genometype III restriction enzyme res subunit01427
NC_003902:1220600:1227462122746212305843123Xanthomonas campestris pv. campestris str. ATCC 33913, completetype III restriction-modification enzyme, helicase subunit01424
NC_016010:1247008:1253833125383312569493117Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetype III restriction-modification enzyme, helicase subunit01411
NC_015152:2549756:2567399256739925704493051Spirochaeta sp. Buddy chromosome, complete genometype III restriction protein res subunit01400
NC_015064:102224:99124991241022313108Acidobacterium sp. MP5ACTX9 chromosome, complete genometype III restriction protein res subunit01198
NC_017080:166180:1716101716101747683159Phycisphaera mikurensis NBRC 102666, complete genomeputative restriction endonuclease01140
NC_016604:917972:9271349271349302023069Mycobacterium rhodesiae NBB3 chromosome, complete genomerestriction endonuclease0693
NC_017904:2162045:2172018217201821750743057Mycobacterium sp. MOTT36Y chromosome, complete genomerestriction endonuclease0681
NC_009464:3135468:3155850315585031586572808Uncultured methanogenic archaeon RC-I, complete genomeputative type III restriction-modification system, restriction subunit7e-117422
NC_013740:1218429:1234677123467712374332757Acidaminococcus fermentans DSM 20731, complete genomeputative type III restriction-modification system, res subunit6e-113409
NC_015508:296856:3211273211273242793153Agrobacterium sp. H13-3 chromosome linear, complete sequencetype III restriction-modification enzyme, helicase subunit2e-112407
NC_017075:1674758:1687704168770416908593156Rubrivivax gelatinosus IL144, complete genomeputative hydrolase2e-109397
NC_019902:3397170:3411286341128634141082823Thioalkalivibrio nitratireducens DSM 14787, complete genomeType III restriction-modification enzyme, helicase subunit3e-106387
NC_014820:582443:6130246130246154472424Cenarchaeum symbiosum A, complete genomehypothetical protein3e-87323
NC_013156:980888:9821339821339849272795Methanocaldococcus fervens AG86, complete genome7e-31136
NC_009455:1025915:1038026103802610407072682Dehalococcoides sp. BAV1 chromosome, complete genometype III restriction enzyme, res subunit3e-1791.7
NC_007404:1570000:1581096158109615838132718Thiobacillus denitrificans ATCC 25259, complete genometype III restriction-modification enzyme helicase subunit2e-1585.1
NC_017080:3712000:3727554372755437302352682Phycisphaera mikurensis NBRC 102666, complete genomeputative restriction endonuclease4e-1584.3
NC_009621:389181:3955913955913982722682Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencetype III restriction protein res subunit1e-1482.8
NC_014010:1392536:1409264140926414119752712Candidatus Puniceispirillum marinum IMCC1322 chromosome, completetype III restriction protein res subunit6e-1377
NC_009720:464078:4741434741434770762934Xanthobacter autotrophicus Py2, complete genometype III restriction protein res subunit6e-1067.4