Pre_GI: BLASTP Hits

Some Help

Query: NC_010803:1009000:1012342 Chlorobium limicola DSM 245, complete genome

Start: 1012342, End: 1012626, Length: 285

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008639:2358592:238163923816392381923285Chlorobium phaeobacteroides DSM 266, complete genomeCRISPR-associated protein Cas28e-43171
NC_011060:2525367:254138725413872541671285Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas26e-40162
NC_008639:2358592:239252523925252392794270Chlorobium phaeobacteroides DSM 266, complete genomeCRISPR-associated protein Cas22e-1374.7
NC_008554:1664131:168328116832811683559279Syntrophobacter fumaroxidans MPOB, complete genomeCRISPR-associated protein Cas27e-1372.4
NC_007775:2546833:255970725597072559985279Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas22e-1270.9
NC_014836:1108919:113047911304791130754276Desulfurispirillum indicum S5 chromosome, complete genomeCRISPR-associated protein Cas24e-1270.1
NC_014484:447889:460643460643460930288Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein Cas28e-1062.4
NC_020126:10091703:100986601009866010098953294Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas2 family protein2e-0961.2
NC_008095:8837612:886267788626778862970294Myxococcus xanthus DK 1622, complete genomeCRISPR-associated protein Cas25e-0959.7
NC_007512:1459685:147272514727251473015291Pelodictyon luteolum DSM 273, complete genomeProtein of unknown function DUF1967e-0959.3
NC_014933:3637172:365808636580863658376291Bacteroides helcogenes P 36-108 chromosome, complete genomeCRISPR-associated protein, Cas2 family9e-0958.9
NC_015954:189000:194794194794195066273Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas21e-0858.5
NC_020126:9726992:973324097332409733539300Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas2 family protein1e-0858.2
NC_007426:1558804:157852915785291578807279Natronomonas pharaonis DSM 2160, complete genomehypothetical protein2e-0858.2
NC_011963:1979136:199450419945041994794291Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated protein, Cas2 family2e-0857.4
NC_011060:1746000:176158617615861761876291Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas24e-0856.6
NC_005823:1105524:113446711344671134751285Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130hypothetical protein2e-0754.3
NC_016012:665171:670097670097670387291Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated protein cas23e-0753.9
NC_014221:1786122:180478518047851805075291Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein Cas25e-0753.1
NC_008741:15699:328013280133091291Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein Cas29e-0752.4
NC_014926:1483974:149317414931741493440267Thermovibrio ammonificans HB-1 chromosome, complete genomeCRISPR-associated protein Cas21e-0652
NC_014034:1394898:139489813948981395188291Rhodobacter capsulatus SB1003 chromosome, complete genomeCas2 family CRISPR-associated protein2e-0651.6
NC_013740:842841:881739881739882029291Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein Cas23e-0650.4