Pre_GI: BLASTP Hits

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Query: NC_010793:541040:543957 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 543957, End: 544184, Length: 228

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010793:126111:1376251376251387641140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase1e-27122
NC_010793:1287877:1298339129833912994781140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase1e-27121
NC_010793:1922000:1924190192419019253291140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-27120
NC_010793:1922000:1929718192971819308571140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase1e-26118
NC_010793:126111:1287981287981299371140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase1e-26118
NC_010793:496500:5000035000035011421140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-26117
NC_010793:668500:6768326768326779711140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-26117
NC_010793:357000:368240368240368881642Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-26117
NC_010793:1695716:1707902170790217090411140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-26117
NC_008346:331820:3628403628403641711332Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRNA-directed DNA polymerase (reverse transcriptase)1e-1168.2
NC_007644:2318855:2325439232543923266741236Moorella thermoacetica ATCC 39073, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1166.2
NC_013440:1436784:1447901144790114492501350Haliangium ochraceum DSM 14365, complete genomeRNA-directed DNA polymerase2e-0961.6
NC_018867:993903:9977499977499990951347Dehalobacter sp. CF chromosome, complete genomeRetron-type reverse transcriptase3e-0960.8
NC_018866:925704:9331289331289344741347Dehalobacter sp. DCA chromosome, complete genomeRetron-type reverse transcriptase3e-0960.8
NC_018866:1706000:1716623171662317179691347Dehalobacter sp. DCA chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0960.8
NC_010981:314745:3562833562833575841302Wolbachia pipientis, complete genomereverse transcriptase8e-0958.9
NC_012416:1079661:1109155110915511104681314Wolbachia sp. wRi, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0858.5
NC_012416:573202:6026966026966040091314Wolbachia sp. wRi, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0858.5
NC_014623:4683671:4704603470460347064411839Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA-directed DNA polymerase3e-0857
NC_019902:1061432:1072862107286210741301269Thioalkalivibrio nitratireducens DSM 14787, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0857
NC_004463:2059500:2069705206970520711801476Bradyrhizobium japonicum USDA 110, complete genomeprobable reverse transcriptase/maturase family protein4e-0856.6
NC_011001:1145508:1153138115313811546701533Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative reverse transcriptase-Group II intron7e-0856.2
NC_019897:2645404:2653914265391426552121299Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase9e-0855.5
NC_019897:4014485:4033591403359140348891299Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase9e-0855.5
NC_018866:1706000:1712113171211317134741362Dehalobacter sp. DCA chromosome, complete genomeRetron-type reverse transcriptase1e-0755.1
NC_010320:1268355:1287128128712812884111284Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase1e-0755.1
NC_008789:835909:848128848128848793666Halorhodospira halophila SL1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)4e-0753.5
NC_014973:595153:6085916085916099101320Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase7e-0752.8
NC_010003:1360472:1386857138685713881761320Petrotoga mobilis SJ95, complete genome7e-0752.8
NC_002947:4994335:5039380503938050405011122Pseudomonas putida KT2440, complete genomegroup II intron-encoding maturase, putative9e-0752.4
NC_016845:1773416:1779858177985817813451488Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative reverse transcriptase/maturase9e-0752.4
NC_016845:2306744:2323071232307123245581488Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative reverse transcriptase/maturase9e-0752.4
NC_016845:4046142:4057358405735840588451488Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative reverse transcriptase/maturase9e-0752.4
NC_011059:65414:8611386113875941482Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)9e-0752.4
NC_008782:2062962:207199820719982072834837Acidovorax sp. JS42, complete genome1e-0652
NC_017249:8221992:8267715826771582690971383Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0652
NC_009921:3551036:3620896362089636223591464Frankia sp. EAN1pec, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0651.2
NC_009921:3384116:3394030339403033954931464Frankia sp. EAN1pec, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0651.2
NC_009921:1645380:1652195165219516536581464Frankia sp. EAN1pec, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0651.2
NC_012560:2451500:2471463247146324732381776Azotobacter vinelandii DJ, complete genomeRNA-directed DNA polymerase2e-0651.2
NC_021150:2451500:2471475247147524732501776Azotobacter vinelandii CA6, complete genomeRNA-directed DNA polymerase2e-0651.2
NC_011002:703194:717606717606718537932Burkholderia cenocepacia J2315 chromosome 3, complete sequence3e-0650.8
NC_008639:2968000:3012714301271430141951482Chlorobium phaeobacteroides DSM 266, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0650.1