Pre_GI: BLASTP Hits

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Query: NC_010741:12542:19415 Treponema pallidum subsp. pallidum SS14, complete genome

Start: 19415, End: 21388, Length: 1974

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Treponema pallidum subsp. pallidum SS14 was isolated in 1977 from a patient with secondary syphilis. This strain is less susceptible than the Nichols strain for a number of antibiotics. This organisms is divided into subspecies each of which causes a specific disease. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000919:12545:1941819418213911974Treponema pallidum subsp. pallidum str. Nichols, complete genometranscription elongation factor01325
NC_021508:12543:1936819368220492682Treponema pallidum subsp. pallidum SS14, complete genometranscription elongation factor GreA01238
NC_017268:1:1937119371220522682Treponema pallidum subsp. pallidum str. Chicago chromosome,01237
NC_016844:12545:1937019370220512682Treponema pallidum subsp. pallidum DAL-1 chromosome, completetranscription elongation factor GreA01237
NC_016842:1:1937319373220542682Treponema pallidum subsp. pertenue str. SamoaD chromosome, completetranscription elongation factor GreA01235
NC_016843:1:1937319373220542682Treponema pallidum subsp. pertenue str. Gauthier chromosome,transcription elongation factor GreA01235
NC_016848:12548:1937319373220542682Treponema pallidum subsp. pertenue str. CDC2 chromosome, completetranscription elongation factor GreA01235
NC_014484:1163576:1198728119872812014242697Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-145516
NC_010673:113133:1281021281021308072706Borrelia hermsii DAH, complete genometranscription elongation factor GreA2e-88327
NC_008710:108057:1278651278651305672703Borrelia turicatae 91E135, complete genometranscription elongation factor GreA3e-87323
NC_019908:1296870:1311199131119913134062208Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscript cleavage factor/hypothetical protein7e-35149