Pre_GI: BLASTP Hits

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Query: NC_010723:3434000:3441468 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 3441468, End: 3445979, Length: 4512

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:3619722:3627045362704536315414497Clostridium botulinum B str. Eklund 17B, complete genomeOB-fold nucleic acid binding domain protein02597
NC_014393:1590893:1593540159354015983064767Clostridium cellulovorans 743B chromosome, complete genomeLPXTG-motif cell wall anchor domain-containing protein0904
NC_014828:2497462:2497462249746225029365475Ethanoligenens harbinense YUAN-3 chromosome, complete genomenucleic acid binding OB-fold tRNA/helicase-type6e-180632
NC_010001:1452167:1455562145556214614115850Clostridium phytofermentans ISDg, complete genomenucleic acid binding OB-fold tRNA/helicase-type1e-160568
NC_010001:1452167:1463388146338814701526765Clostridium phytofermentans ISDg, complete genomenucleic acid binding OB-fold tRNA/helicase-type6e-156552
NC_014098:2225174:2225174222517422314076234Bacillus tusciae DSM 2912 chromosome, complete genomeIg domain protein group 2 domain protein3e-95351
NC_009828:1530732:1550881155088115526051725Thermotoga lettingae TMO, complete genomePHP domain protein2e-48195
NC_013406:7024149:7031061703106170371026042Paenibacillus sp. Y412MC10 chromosome, complete genomemetallophosphoesterase6e-41170
NC_008699:2916752:2920249292024929215381290Nocardioides sp. JS614, complete genomehypothetical protein7e-1687.4
NC_014006:2626544:2630965263096526323651401Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein2e-1379.7