Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:1452167 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14521671452907741ABC transporter relatedQuickGO ontologyBLASTP
145327414551271854ATP-dependent DNA helicase RecQQuickGO ontologyBLASTP
145556214614115850nucleic acid binding OB-fold tRNAhelicase-typeQuickGO ontologyBLASTP
146151714626741158YibEF family proteinQuickGO ontologyBLASTP
146338814701526765nucleic acid binding OB-fold tRNAhelicase-typeQuickGO ontologyBLASTP
14702291470873645GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
14712871471604318hypothetical protein
147204014737041665DNA mismatch repair protein MutS domain proteinQuickGO ontologyBLASTP