Pre_GI: BLASTP Hits

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Query: NC_010673:479552:494772 Borrelia hermsii DAH, complete genome

Start: 494772, End: 495284, Length: 513

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:488815:492259492259492771513Borrelia turicatae 91E135, complete genomelipoprotein signal peptidase1e-56218
NC_011244:497212:509501509501510013513Borrelia recurrentis A1, complete genomesignal peptidase II6e-54209
NC_015921:481532:487914487914488426513Borrelia bissettii DN127 chromosome, complete genomesignal peptidase II6e-39159
NC_011728:477439:485078485078485590513Borrelia burgdorferi ZS7, complete genomesignal peptidase II1e-38158
NC_001318:479709:488983488983489495513Borrelia burgdorferi B31, complete genomesignal peptidase II1e-38158
NC_008277:485299:492999492999493511513Borrelia afzelii PKo, complete genomesignal peptidase II9e-38155
NC_017238:482222:491558491558492070513Borrelia afzelii PKo chromosome, complete genomesignal peptidase II9e-38155
NC_006156:484951:491337491337491849513Borrelia garinii PBi chromosome linear, complete sequencesignal peptidase II2e-37154
NC_002967:2656000:265723626572362657757522Treponema denticola ATCC 35405, complete genomesignal peptidase II4e-1580.5
NC_015577:383071:388314388314388850537Treponema azotonutricium ZAS-9 chromosome, complete genomesignal peptidase II2e-1065.5
NC_016633:2239413:225932022593202259850531Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomelipoprotein signal peptidase7e-1063.2