Pre_GI: BLASTP Hits

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Query: NC_010572:33724:42629 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 42629, End: 44593, Length: 1965

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:8493946:8501337850133785033011965Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein with SsgA-like domain01132
NC_010572:82000:1334981334981354531956Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein with SsgA-like domain2e-180632
NC_013093:2230171:223452922345292234954426Actinosynnema mirum DSM 43827, complete genomesporulation and cell division protein SsgA6e-1066.6
NC_019673:3041936:304215330421533042578426Saccharothrix espanaensis DSM 44229 complete genomeSporulation and cell division protein1e-0965.5
NC_009142:6199326:623327362332736233695423Saccharopolyspora erythraea NRRL 2338, complete genomeputative sporulation and cell division regulator protein5e-0757
NC_014391:1812500:181630518163051816736432Micromonospora aurantiaca ATCC 27029 chromosome, complete genomesporulation and cell division protein SsgA4e-0653.9
NC_014815:2055286:206093020609302061361432Micromonospora sp. L5 chromosome, complete genomesporulation and cell division protein ssga4e-0653.9
NC_015434:1885373:188955918895591889990432Verrucosispora maris AB-18-032 chromosome, complete genomesporulation and cell division protein ssga4e-0653.9