Pre_GI: BLASTP Hits

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Query: NC_010501:4379920:4400207 Pseudomonas putida W619, complete genome

Start: 4400207, End: 4400446, Length: 240

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1738500:173854917385491738800252Pseudomonas syringae pv. syringae B728a, complete genomeSirA-like7e-33139
NC_012660:1579204:161854216185421618781240Pseudomonas fluorescens SBW25 chromosome, complete genomeputative SirA-like protein2e-32137
NC_018080:4436646:445771644577164457967252Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-30129
NC_002516:1031386:109060610906061090857252Pseudomonas aeruginosa PAO1, complete genomehypothetical protein6e-30129
NC_019940:2893535:291481729148172915047231Thioflavicoccus mobilis 8321 chromosome, complete genomeredox protein, regulator of disulfide bond formation6e-1682.8
NC_018868:1271742:129391712939171294177261Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeRhodanese-like domain-containing protein3e-1580.5
NC_015677:3339181:335607833560783356305228Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-1477
NC_003295:856775:856775856775857002228Ralstonia solanacearum GMI1000, complete genomehypothetical protein7e-1475.9
NC_011126:992994:100897810089781009211234Hydrogenobaculum sp. Y04AAS1, complete genomeSirA family protein1e-1271.6
NC_020411:981888:997880997880998113234Hydrogenobaculum sp. HO, complete genomeSirA-like domain-containing protein1e-1271.6
NC_015587:981808:997800997800998033234Hydrogenobaculum sp. SHO chromosome, complete genomeSirA-like domain-containing protein1e-1271.6
NC_015557:981698:997689997689997922234Hydrogenobaculum sp. 3684 chromosome, complete genomeSirA-like domain-containing protein1e-1271.6
NC_014733:107394:112396112396112644249Methylovorus sp. MP688 chromosome, complete genomesira family protein2e-1270.9
NC_008781:3365468:336845633684563368689234Polaromonas naphthalenivorans CJ2, complete genomeSirA family protein2e-1270.9
NC_014972:3771642:377957837795783779835258Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSirA-like domain-containing protein3e-1270.5
NC_013411:2951559:295456529545652954792228Geobacillus sp. Y412MC61, complete genomeSirA family protein3e-1270.5
NC_014915:2092678:209449720944972094724228Geobacillus sp. Y412MC52 chromosome, complete genomeSirA-like domain-containing protein3e-1270.5
NC_004578:2185907:220702522070252207279255Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1270.5
NC_006322:2658587:268014026801402680367228Bacillus licheniformis ATCC 14580, complete genomeYrkI5e-1269.7
NC_006270:2657726:267928026792802679507228Bacillus licheniformis ATCC 14580, complete genomeconserved protein YrkI5e-1269.7
NC_020304:1222000:122670912267091226966258Desulfocapsa sulfexigens DSM 10523, complete genomeputative redox protein, regulator of disulfide bond formation6e-1269.3
NC_020272:3396800:342882434288243429051228Bacillus amyloliquefaciens IT-45, complete genomeSirA-like protein1e-1168.6
NC_006510:2110430:211043021104302110999570Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-1168.6
NC_014915:2092678:209267820926782093247570Geobacillus sp. Y412MC52 chromosome, complete genomeSirA-like domain-containing protein1e-1168.6
NC_013411:2951559:295274629527462953315570Geobacillus sp. Y412MC61, complete genomeSirA family protein1e-1168.6
NC_020210:2133996:213603621360362136605570Geobacillus sp. GHH01, complete genomeUPF0033 family protein1e-1168.6
NC_019842:484933:520453520453520680228Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-1168.2
NC_009725:496443:526445526445526672228Bacillus amyloliquefaciens FZB42, complete genomeYrkI2e-1168.2
NC_019896:1483073:151547615154761515703228Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-1168.2
NC_000964:2702376:271007427100742710301228Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1167.8
NC_020210:2133996:213784821378482138075228Geobacillus sp. GHH01, complete genomeUPF0033 family protein4e-1167
NC_009328:2083386:210212321021232102389267Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemolybdopterin biosynthesis MoeB-like protein3e-1167
NC_008576:4701930:470389547038954704119225Magnetococcus sp. MC-1, complete genomeSirA family protein4e-1166.6
NC_006510:2110430:211224721122472112474228Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-1166.6
NC_009328:2083386:210029921002992100868570Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemolybdopterin biosynthesis MoeB protein-like protein5e-1166.6
NC_014976:684000:694711694711694938228Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein7e-1165.9
NC_008340:362000:376136376136376378243Alkalilimnicola ehrlichei MLHE-1, complete genomeSirA family protein8e-1165.9
NC_017208:823540:835562835562835792231Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemolybdopterin biosynthesis MoeB1e-1065.5
NC_021171:4425050:444325244432524443830579Bacillus sp. 1NLA3E, complete genomeSirA family protein2e-1064.3
NC_006274:765870:778674778674778904231Bacillus cereus E33L, complete genomehypothetical protein3e-1063.9
NC_006322:2658587:268163026816302682202573Bacillus licheniformis ATCC 14580, complete genomeYrkF4e-1063.5
NC_006270:2657726:268077026807702681342573Bacillus licheniformis ATCC 14580, complete genomeYrkF4e-1063.5
NC_006274:765870:776909776909777469561Bacillus cereus E33L, complete genomeconserved hypothetical protein; probable rhodanese domain5e-1063.2
NC_017208:823540:833804833804834364561Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemolybdopterin biosynthesis MoeB1e-0961.6
NC_019896:1483073:151347915134791514036558Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein3e-0960.5
NC_014976:684000:696441696441696995555Bacillus subtilis BSn5 chromosome, complete genomeputative rhodanese-related sulfur transferase3e-0960.5
NC_009848:161373:183791183791184351561Bacillus pumilus SAFR-032, complete genomeresponse regulator3e-0960.5
NC_000964:2702376:271180327118032712360558Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-0960.1
NC_019897:4014485:402701940270194027597579Thermobacillus composti KWC4 chromosome, complete genomerhodanese-related sulfurtransferase6e-0959.7
NC_019897:4014485:402921640292164029440225Thermobacillus composti KWC4 chromosome, complete genomeredox protein, regulator of disulfide bond formation7e-0959.3
NC_013923:45876:809548095481199246Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceSirA family protein1e-0858.9
NC_015151:2285175:229588122958812296165285Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeSirA family protein4e-0857
NC_014831:285759:295755295755296363609Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRhodanese domain protein1e-0755.1
NC_009428:725871:728535728535728843309Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeSirA family protein2e-0754.7
NC_007644:416000:437795437795438022228Moorella thermoacetica ATCC 39073, complete genomeSirA-like5e-0753.1
NC_009725:496443:524715524715525281567Bacillus amyloliquefaciens FZB42, complete genomeYrkF9e-0752.4
NC_019842:484933:518723518723519289567Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-0652
NC_009635:985935:989413989413989631219Methanococcus aeolicus Nankai-3 chromosome, complete genomeSirA family protein1e-0652
NC_009778:4188000:422846642284664228711246Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0651.6
NC_015519:270637:2736932736932762452553Tepidanaerobacter sp. Re1 chromosome, complete genomeCoA-disulfide reductase3e-0650.8
NC_015555:211935:2263132263132287812469Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCoA-disulfide reductase5e-0649.7