Pre_GI: BLASTP Hits

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Query: NC_010501:2511887:2534353 Pseudomonas putida W619, complete genome

Start: 2534353, End: 2535288, Length: 936

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:3088866:312118031211803122172993Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase family protein1e-78293
NC_009439:2427120:247785424778542478813960Pseudomonas mendocina ymp, complete genomephage integrase family protein1e-77290
NC_015410:2698572:271550727155072716487981Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein1e-77290
NC_007508:2756945:2770341277034127716151275Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecointegrate resolution protein S1e-75283
NC_008463:3168837:318711031871103188081972Pseudomonas aeruginosa UCBPP-PA14, complete genomeCointegrate resolution protein S1e-73276
NC_009656:3127240:316451031645103165481972Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrate resolution protein S1e-73276
NC_018080:3088866:309571130957113096682972Pseudomonas aeruginosa DK2 chromosome, complete genomecointegrate resolution protein S1e-73276
NC_016147:623666:6367486367486380191272Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative phage integrase8e-72270
NC_020541:2191600:220585722058572206834978Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC6e-69261
NC_020541:2264521:227697222769722277952981Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC7e-69261
NC_009138:1518315:152966615296661530664999Herminiimonas arsenicoxydans, complete genomeunknown prophage; integrase-like protein (Cointegrate resolution protein S) (partial)1e-67256
NC_011662:2374955:238053023805302381471942Thauera sp. MZ1T, complete genomeintegrase family protein6e-67254
NC_009659:1984980:198761919876191988593975Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S8e-67253
NC_017986:5867782:586819858681985869166969Pseudomonas putida ND6 chromosome, complete genomecointegrase4e-66251
NC_009659:1923925:196707519670751968007933Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S2e-65249
NC_008750:2332000:2337459233745923387091251Shewanella sp. W3-18-1, complete genomephage integrase family protein1e-63243
NC_013166:1341575:135602813560281356969942Kangiella koreensis DSM 16069, complete genomeintegrase family protein4e-62238
NC_007507:101887:123354123354124199846Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S1e-60233
NC_007507:101887:104425104425105138714Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S3e-46185
NC_008739:41793:6420664206653481143Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencephage integrase family protein8e-36150
NC_011138:3182807:3198680319868031996901011Alteromonas macleodii 'Deep ecotype', complete genomePhage integrase3e-35149
NC_009656:3127240:314265631426563143531876Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrase4e-35148
NC_013958:29548:341623416235157996Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase domain protein SAM domain protein5e-35148
NC_008573:195317:2039462039462049681023Shewanella sp. ANA-3 plasmid 1, complete sequencephage integrase family protein2e-34146
NC_011894:983572:995769995769996758990Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein9e-33140
NC_016812:258500:2835232835232845601038Sinorhizobium fredii HH103, complete genomeintegrase family protein3e-29129
NC_013206:21288:386753867539646972Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446integrase family protein3e-21102
NC_012988:3288253:330339033033903304355966Methylobacterium extorquens DM4, complete genomeintegrase1e-1377.8
NC_018524:4848154:4876338487633848775551218Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephage integrase family protein3e-1376.3
NC_006672:47610:4761047610490581449Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceIntegrase-like protein5e-1375.5
NC_007507:101887:104170104170104373204Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,cointegrate resolution protein S fragment1e-1274.3
NC_011887:110618:1319371319371329981062Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeintegrase family protein1e-1273.9
NC_010510:409469:416469416469417404936Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein6e-1271.6
NC_010511:3674178:372811937281193729042924Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-1170.1
NC_014210:2597000:2611347261134726125881242Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein3e-1169.3
NC_012988:2455807:2500951250095125021231173Methylobacterium extorquens DM4, complete genomeintegrase/recombinase protein4e-1168.9
NC_013211:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completephage DNA recombinase5e-1168.6
NC_017105:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,phage DNA recombinase5e-1168.6
NC_017113:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completephage DNA recombinase5e-1168.6
NC_017118:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completephage DNA recombinase5e-1168.6
NC_017122:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completephage DNA recombinase5e-1168.6
NC_017126:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completephage DNA recombinase5e-1168.6
NC_017131:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completephage DNA recombinase5e-1168.6
NC_017149:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completephage DNA recombinase5e-1168.6
NC_008536:8541267:856873485687348569168435Solibacter usitatus Ellin6076, complete genomehypothetical protein5e-1168.6
NC_003037:1245645:1264010126401012651671158Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencepossible integrase-like protein9e-1064.7
NC_009621:389181:3891813891813903561176Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencephage integrase family protein2e-0963.2
NC_014541:2122788:212976021297602130719960Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein5e-0962
NC_014032:825793:9156479156479177042058Salinibacter ruber M8 chromosome, complete genometyrosine recombinase XerD3e-0859.3
NC_013235:3129384:313222031322203133188969Nakamurella multipartita DSM 44233, complete genomeintegrase family protein8e-0858.2
NC_007677:771168:8244758244758265382064Salinibacter ruber DSM 13855, complete genomePhage integrase, N-terminal SAM-like domain protein1e-0757.4
NC_016628:193000:215655215655216623969Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDNA integration/recombination/inversion protein4e-0652.4
NC_007333:1743890:1790694179069417917251032Thermobifida fusca YX, complete genomeputative integrase/recombinase4e-0652.4