Pre_GI: BLASTP Hits

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Query: NC_010475:420978:428905 Synechococcus sp. PCC 7002, complete genome

Start: 428905, End: 429327, Length: 423

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007517:1468719:149838914983891498799411Geobacter metallireducens GS-15, complete genomePilT protein-like4e-23106
NC_007484:2893878:289387828938782894288411Nitrosococcus oceani ATCC 19707, complete genomePilT protein-like4e-1889.7
NC_009483:3480740:349537534953753495776402Geobacter uraniireducens Rf4 chromosome, complete genomePilT domain-containing protein1e-1788.2
NC_011146:2200142:221679222167922217193402Geobacter bemidjiensis Bem, complete genomePilT protein domain protein2e-1787.4
NC_008786:2573558:259007325900732590474402Verminephrobacter eiseniae EF01-2, complete genomePilT protein-like protein9e-1372
NC_013959:83992:954949549495889396Sideroxydans lithotrophicus ES-1 chromosome, complete genomePilT protein domain protein2e-0961.2
NC_007086:3118116:313774931377493138144396Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein6e-0856.2
NC_003902:1858349:190168419016841902079396Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein6e-0856.2
NC_013205:576583:615486615486615935450Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,PilT protein domain protein2e-0754.7
NC_010161:2100500:211724921172492117647399Bartonella tribocorum CIP 105476, complete genomehypothetical protein6e-0752.8
NC_020541:1014176:101818610181861018581396Rhodanobacter sp. 2APBS1, complete genomeputative nucleic-acid-binding protein, contains PIN domain8e-0752.4
NC_014032:338547:353089353089353670582Salinibacter ruber M8 chromosome, complete genomehypothetical protein1e-0652
NC_014220:170021:195255195255195659405Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomePilT protein domain protein2e-0651.6
NC_012962:3568046:360312836031283603529402Photorhabdus asymbiotica, complete genomehypothetical protein3e-0650.8
NC_013205:1187812:124308712430871243491405Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,PilT protein domain protein4e-0650.1
NC_020209:945000:963298963298963693396Pseudomonas poae RE*1-1-14, complete genomehypothetical protein5e-0649.7