Pre_GI: BLASTP Hits

Some Help

Query: NC_010407:3174470:3180419 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3180419, End: 3180604, Length: 186

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010407:3174470:318186531818653182470606Clavibacter michiganensis subsp. sepedonicus chromosome, completedeoxycytidine triphosphate deaminase8e-30129
NC_006087:2439252:244557224455722446177606Leifsonia xyli subsp. xyli str. CTCB07, complete genomedeoxycytidine triphosphate deaminase1e-22105
NC_003155:5443230:545335454533545453929576Streptomyces avermitilis MA-4680, complete genomedeoxycytidine triphosphate deaminase2e-1891.3
NC_013929:4807910:481216648121664812741576Streptomyces scabiei 87.22 chromosome, complete genomedeoxynucleotide triphosphate deaminase2e-1890.9
NC_013595:891897:907448907448908023576Streptosporangium roseum DSM 43021, complete genomedeoxycytidine triphosphate deaminase3e-1890.5
NC_016111:3486000:349345934934593494034576Streptomyces cattleya NRRL 8057, complete genomeDeoxycytidine triphosphate deaminase5e-1889.7
NC_018750:3741581:375690237569023757540639Streptomyces venezuelae ATCC 10712, complete genomeDeoxycytidine triphosphate deaminase5e-1889.7
NC_014246:651801:655183655183655803621Mobiluncus curtisii ATCC 43063 chromosome, complete genomedeoxycytidine triphosphate deaminase6e-1889.4
NC_013510:262888:269703269703270278576Thermomonospora curvata DSM 43183, complete genomedeoxycytidine triphosphate deaminase2e-1788.2
NC_015953:3456535:346547134654713466046576Streptomyces sp. SirexAA-E chromosome, complete genomedeoxycytidine triphosphate deaminase7e-1785.9
NC_014210:5370868:538555653855565386146591Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,deoxycytidine triphosphate deaminase9e-1785.5
NC_015957:196000:204465204465205079615Streptomyces violaceusniger Tu 4113 chromosome, complete genomedeoxycytidine triphosphate deaminase3e-1683.6
NC_014666:300571:303215303215303811597Frankia sp. EuI1c chromosome, complete genomedeoxycytidine triphosphate deaminase3e-1683.6
NC_010572:4024810:403045340304534031028576Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative deoxynucleotide triphosphate deaminase7e-1682.4
NC_002944:4254011:426877542687754269347573Mycobacterium avium subsp. paratuberculosis K-10, complete genomedeoxycytidine triphosphate deaminase1e-1581.6
NC_014659:4299552:433215943321594332746588Rhodococcus equi 103S, complete genome2'-deoxycytidine 5'-triphosphate deaminase2e-1581.3
NC_014814:483444:499982499982500554573Mycobacterium sp. Spyr1 chromosome, complete genomedCTP deaminase2e-1581.3
NC_012522:5895946:591558659155865916155570Rhodococcus opacus B4, complete genomedeoxycytidine triphosphate deaminase9e-1579
NC_010612:681544:700534700534701106573Mycobacterium marinum M, complete genomedeoxycytidine triphosphate deaminase, Dcd1e-1478.2