Pre_GI: BLASTP Hits

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Query: NC_010407:3132683:3136652 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3136652, End: 3136897, Length: 246

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010399:13222:168781687817651774Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completehypothetical protein5e-31132
NC_014215:421683:435942435942436691750Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Hypothetical secreted protein1e-0961.6
NC_014246:1579811:159682815968281597691864Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein2e-0858.2
NC_013093:1213908:121661212166121217259648Actinosynnema mirum DSM 43827, complete genomehypothetical protein6e-0752.8
NC_018532:166468:209819209819210607789Arthrobacter sp. Rue61a plasmid p232, complete sequenceexcalibur domain-containing protein1e-0651.6
NC_018531:3679978:3680569368056936820801512Arthrobacter sp. Rue61a chromosome, complete genomeS-layer domain protein8e-0649.3
NC_014643:1986440:199091119909111991816906Rothia dentocariosa ATCC 17931 chromosome, complete genomeextracellular deoxyribonuclease8e-0649.3
NC_008711:3520515:3526048352604835273191272Arthrobacter aurescens TC1, complete genomeputative S-layer domain protein9e-0648.9