Pre_GI: BLASTP Hits

Some Help

Query: NC_010334:1783500:1791556 Shewanella halifaxensis HAW-EB4, complete genome

Start: 1791556, End: 1793094, Length: 1539

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015311:1612366:1620568162056816220941527Prevotella denticola F0289 chromosome, complete genomepolysaccharide biosynthesis protein6e-99361
NC_015164:4023881:4032926403292640344641539Bacteroides salanitronis DSM 18170 chromosome, complete genomepolysaccharide biosynthesis protein8e-89328
NC_009615:2184300:2199149219914922006781530Parabacteroides distasonis ATCC 8503 chromosome, complete genometransmembrane protein3e-88325
NC_019904:5241444:5275802527580252773311530Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein8e-87321
NC_014370:1117283:1139451113945111409771527Prevotella melaninogenica ATCC 25845 chromosome chromosome I,polysaccharide biosynthesis protein4e-83309
NC_013037:48900:7541775417769491533Dyadobacter fermentans DSM 18053, complete genomepolysaccharide biosynthesis protein9e-83308
NC_015164:325212:3274393274393289741536Bacteroides salanitronis DSM 18170 chromosome, complete genomemulti antimicrobial extrusion protein MatE3e-80299
NC_003228:3212500:3250670325067032522141545Bacteroides fragilis NCTC 9343, complete genomeputative transmembrane protein7e-77288
NC_015500:2112975:2134862213486221365531692Treponema brennaborense DSM 12168 chromosome, complete genomemulti antimicrobial extrusion protein MatE9e-77288
NC_015500:1923514:1956461195646119580111551Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein4e-76285
NC_015500:533528:5493495493495509561608Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein3e-75283
NC_013416:1621469:1645377164537716469091533Aggregatibacter actinomycetemcomitans D11S-1, complete genomepolysaccharide biosynthesis protein2e-71270
NC_016513:1958500:1983326198332619848491524Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepolysaccharide biosynthesis protein3e-71269
NC_015164:3210885:3220225322022532217631539Bacteroides salanitronis DSM 18170 chromosome, complete genomepolysaccharide biosynthesis protein1e-70267
NC_014033:2080818:2131012213101221325681557Prevotella ruminicola 23 chromosome, complete genomehypothetical protein3e-68259
NC_015500:2197000:2205199220519922067371539Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein9e-64244
NC_009614:3385187:3386588338658833881051518Bacteroides vulgatus ATCC 8482 chromosome, complete genometransmembrane protein3e-63243
NC_015740:2587323:2603077260307726045941518Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transmembrane protein5e-60232
NC_006347:3166000:3189164318916431906991536Bacteroides fragilis YCH46, complete genomeputative flippase5e-57222
NC_014033:522363:5317935317935333161524Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-55216
NC_015311:24071:3229732297338501554Prevotella denticola F0289 chromosome, complete genomepolysaccharide biosynthesis protein1e-53211
NC_015566:1659288:1672495167249516740151521Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-52206
NC_015567:1660462:1672507167250716740271521Serratia sp. AS9 chromosome, complete genomehypothetical protein5e-52206
NC_009615:4642500:4658447465844746599701524Parabacteroides distasonis ATCC 8503 chromosome, complete genomeflippase9e-52204
NC_009092:1599526:1618274161827416197821509Shewanella loihica PV-4, complete genomepolysaccharide biosynthesis protein4e-48192
NC_010468:1775000:1786050178605017875881539Escherichia coli ATCC 8739, complete genomeputative transmembrane protein2e-39164