Pre_GI: BLASTP Hits

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Query: NC_010162:12224154:12250826 Sorangium cellulosum 'So ce 56', complete genome

Start: 12250826, End: 12251947, Length: 1122

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010162:8585856:8596835859683585978871053Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor9e-65247
NC_010162:11812211:1182001711820017118211111095Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor4e-63242
NC_010162:8585856:860173886017388602307570Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0860.1
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-0757
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0653.9
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0653.5
NC_010162:9311465:933443893344389334908471Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-0653.1
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor5e-0652.4