Pre_GI: BLASTP Hits

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Query: NC_010102:997417:1004790 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1004790, End: 1005323, Length: 534

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011274:2044000:206809720680972069059963Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-23107
NC_011294:2053991:207696920769692077931963Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-23107
NC_011205:2180598:220398722039872204949963Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-23107
NC_016831:947281:965479965479966441963Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-23107
NC_004431:2185750:220880522088052209767963Escherichia coli CFT073, complete genomehypothetical protein7e-23106
NC_008253:1938975:196196019619601962922963Escherichia coli 536, complete genomehypothetical protein7e-23106