Pre_GI: BLASTP Hits

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Query: NC_010102:931055:953084 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 953084, End: 954142, Length: 1059

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009436:2776410:2780797278079727818551059Enterobacter sp. 638, complete genomeinner membrane protein1e-163576
NC_015663:4950000:4951967495196749530251059Enterobacter aerogenes KCTC 2190 chromosome, complete genomeinner membrane protein YeeA4e-160564
NC_011740:2072173:2077797207779720788641068Escherichia fergusonii ATCC 35469, complete genomeInner membrane protein yeeA2e-144511
NC_013508:1262333:1274329127432912753871059Edwardsiella tarda EIB202, complete genomehypothetical protein1e-96353
NC_013364:2612822:261318626131862613881696Escherichia coli O111:H- str. 11128, complete genome2e-79296
NC_013364:2612822:261282226128222613244423Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-51202
NC_005085:1269787:1316968131696813180291062Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-23109
NC_004578:568236:5682365682365693121077Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-23108
NC_010678:114000:1285521285521296221071Ralstonia pickettii 12J chromosome 2, complete sequenceputative transmembrane protein2e-22106
NC_012857:557911:5723465723465734161071Ralstonia pickettii 12D chromosome 2, complete genomehypothetical protein2e-22106
NC_003296:140889:1554331554331565181086Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN8e-22104
NC_014310:94645:1129571129571140421086Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein2e-20100
NC_014752:131994:1375421375421386691128Neisseria lactamica ST-640, complete genomehypothetical protein2e-1893.2