Pre_GI: BLASTP Hits

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Query: NC_010102:683444:702121 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 702121, End: 702240, Length: 120

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2323017:233911223391122339231120Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1373.6
NC_016857:2325190:234128523412852341404120Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-1373.6
NC_016832:687000:704027704027704146120Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-1373.6
NC_011083:2375061:239114923911492391268120Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-1373.6
NC_011080:2342672:234535523453552345474120Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1373.6
NC_011205:2462025:246456024645602464829270Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-1168.6