Pre_GI: BLASTP Hits

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Query: NC_010102:683444:700781 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 700781, End: 700969, Length: 189

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2323017:234038323403832340760378Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-26118
NC_011083:2375061:239242023924202392797378Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative homolog of virulence protein MsgA1e-26118
NC_012125:1517925:153511315351131535535423Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence protein MsgA-like protein3e-26117
NC_017046:2324554:234187823418782342297420Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein msgA4e-26116
NC_011205:2462025:246598124659812466358378Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853virulence protein MsgA5e-26116
NC_016857:2325190:234261623426162342933318Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein9e-1579
NC_016856:2379027:239645323964532396770318Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein9e-1579