Pre_GI: BLASTP Hits

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Query: NC_010102:2862178:2869904 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2869904, End: 2871061, Length: 1158

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2870428:2879530287953028806451116Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-103375
NC_012917:3684840:3693835369383536949501116Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-98360
NC_010801:238430:2481422481422493381197Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein2e-52206
NC_011663:2813033:2820851282085128220501200Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-51203
NC_008577:2402165:2427014242701424281471134Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein4e-48192
NC_012691:2476223:2488000248800024891481149Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-46187
NC_012225:1497934:1510698151069815117351038Brachyspira hyodysenteriae WA1, complete genomehypothetical protein4e-27122
NC_004547:1837500:1853836185383618548791044Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-24112