Pre_GI: BLASTP Hits

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Query: NC_010102:2762304:2769167 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2769167, End: 2769382, Length: 216

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:332087:347876347876348136261Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-36150
NC_016856:332771:348560348560348820261Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-36150
CU928145:3360967:339271733927173393025309Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative transcriptional regulator4e-1993.2
NC_011748:3360967:339271733927173393025309Escherichia coli 55989, complete genomeconserved hypothetical protein; putative transcriptional regulator4e-1993.2
NC_011742:3245500:325179032517903252098309Escherichia coli S88 chromosome, complete genomehypothetical protein4e-1993.2
NC_004431:4955658:496185449618544962162309Escherichia coli CFT073, complete genomehypothetical protein4e-1993.2
NC_008563:3332114:333700633370063337275270Escherichia coli APEC O1, complete genomehypothetical protein2e-1890.9
NC_016831:2667561:267637226763722676521150Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1375.5