Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1847909 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1847909, End: 1848973, Length: 1065

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:2123819:2126736212673621277971062Serratia marcescens WW4, complete genomeputative bacteriophage protein1e-165582
NC_011741:2715246:2731969273196927330361068Escherichia coli IAI1 chromosome, complete genomehypothetical protein7e-132470
CU928160:2715246:2731969273196927330361068Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from bacteriophage origin7e-132470
NC_011080:1166951:1166951116695111680181068Salmonella enterica subsp. enterica serovar Newport str. SL254,putative bacteriophage protein9e-132470
NC_016845:2306744:2312299231229923133211023Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative bacteriophage protein1e-108393
NC_007712:2287053:231237623123762313356981Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-92338
NC_007712:3067000:307939030793903080370981Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-92338
NC_007712:2806500:282984228298422830822981Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-92338
NC_009255:1369200:138132113813211382289969Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein1e-41171
NC_009720:4033983:406612540661254067105981Xanthobacter autotrophicus Py2, complete genomehypothetical protein7e-34144
NC_010505:2103887:211551421155142116482969Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein8e-24111