Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1834772 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1834772, End: 1835881, Length: 1110

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2756000:2773259277325927743681110Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein0763
NC_016856:2812905:2827727282772728288361110Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Senterohemolysin 1-like protein0762
NC_011080:2761403:2776225277622527773341110Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-1 prophage protein0762
NC_013850:2182337:2187585218758521886941110Klebsiella variicola At-22 chromosome, complete genomeDNA single-strand annealing protein RecT-like protein0685
NC_015663:4522109:4544187454418745452961110Enterobacter aerogenes KCTC 2190 chromosome, complete genomerecombinase, RecT family protein0674
NC_011283:3177350:3193674319367431947831110Klebsiella pneumoniae 342 chromosome, complete genomerecombinase, RecT family0660
NC_020181:929000:935813935813936751939Enterobacter aerogenes EA1509E, complete genomeGifsy-2 prophage RecT7e-155546
NC_009648:1541699:1545742154574215467431002Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative entero exodeoxyribonuclease VIII5e-125447
NC_009792:1770106:1793818179381817949061089Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-110397
NC_003198:1908238:1930637193063719316891053Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein9e-86317
NC_020211:2094500:2094544209454420956111068Serratia marcescens WW4, complete genomerecT family protein5e-78291
NC_014306:3524980:357608635760863576961876Erwinia billingiae Eb661, complete genomegifsy-2 prophage RecT, probable fragment2e-70266
NC_012779:1966205:1968696196869619697661071Edwardsiella ictaluri 93-146, complete genomegifsy-1 prophage protein2e-56219
NC_013508:1687432:1710552171055217116221071Edwardsiella tarda EIB202, complete genomehypothetical protein2e-53209
NC_015379:4691868:469812046981204699088969Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative gifsy-1 prophage protein3e-45182
NC_011294:1006630:101357910135791013812234Salmonella enterica subsp. enterica serovar Enteritidis str3e-34146
NC_011894:3671162:368968436896843690595912Methylobacterium nodulans ORS 2060, complete genomehypothetical protein1e-26121
NC_011894:7035285:7057259705725970582841026Methylobacterium nodulans ORS 2060, complete genomehypothetical protein2e-25117
NC_017033:2081206:209771320977132098534822Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein2e-23110
NC_010674:2856997:286607328660732866816744Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein2e-1067