Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1830296 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1830296, End: 1830679, Length: 384

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:1770106:178738717873871787770384Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-49192
NC_013850:2182337:219472021947202195103384Klebsiella variicola At-22 chromosome, complete genomehelix-turn-helix domain protein2e-47187
NC_016856:2812905:282134128213412821736396Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulator8e-35145
NC_015224:2095816:210463321046332105052420Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding protein1e-1581.6
NC_008800:2013450:201947120194712019890420Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative DNA-binding protein2e-1580.9
NC_003198:1908238:192490319249031925322420Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulator7e-1269.3
NC_016612:3803130:381419638141963814579384Klebsiella oxytoca KCTC 1686 chromosome, complete genomehelix-turn-helix domain-containing protein8e-1165.9
NC_014838:218000:230333230333231025693Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceputative phage repressor9e-1165.5
NC_020181:2097066:211339821133982113721324Enterobacter aerogenes EA1509E, complete genomeputative regulator4e-0960.1
NC_010102:1829357:183096518309651831108144Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0857.8