Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1152890 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1152890, End: 1153078, Length: 189

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1391971:140270614027061402897192Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-29126
NC_016831:1690811:171156717115671711755189Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-29125
NC_016856:1957263:197623519762351976423189Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-28123
NC_011080:1944226:196983619698361970024189Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein4e-28123
NC_016857:1903426:192246419224641922586123Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein5e-1683.2