Pre_GI: BLASTP Hits

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Query: NC_010067:2488141:2499651 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2499651, End: 2499869, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010623:1961685:2031020203102020321981179Burkholderia phymatum STM815 chromosome 2, complete sequenceL-carnitine dehydratase/bile acid-inducible protein F4e-1270.1
NC_016948:3023940:3029394302939430305901197Mycobacterium intracellulare MOTT-64 chromosome, complete genomeL-carnitine dehydratase/bile acid-inducible protein F5e-1166.6
NC_014323:3195178:3195178319517831963771200Herbaspirillum seropedicae SmR1 chromosome, complete genomeacyl-CoA transferases/carnitine dehydratase9e-1165.5
NC_008595:1869284:1884544188454418857401197Mycobacterium avium 104, complete genomeL-carnitine dehydratase/bile acid-inducible protein F1e-1065.1
NC_008313:2629281:2639427263942726406171191Ralstonia eutropha H16 chromosome 1, complete sequencepredicted acyl-CoA transferase/carnitine dehydratase3e-1063.9
NC_016043:1603499:1603499160349916046921194Taylorella asinigenitalis MCE3 chromosome, complete genomeL-carnitine dehydratase/bile acid-inducible protein F1e-0962
NC_015259:485015:5538315538315549881158Polymorphum gilvum SL003B-26A1 chromosome, complete genomeformyl-CoA transferase-like protein2e-0961.6
NC_008596:4104476:4118016411801641191761161Mycobacterium smegmatis str. MC2 155, complete genomeL-carnitine dehydratase/bile acid-inducible protein F2e-0961.2
NC_015727:1050500:1064002106400210651681167Cupriavidus necator N-1 plasmid BB1p, complete sequenceL-carnitine dehydratase/bile acid-inducible protein F2e-0961.2
NC_016943:3270308:3310547331054733117311185Blastococcus saxobsidens DD2, complete genomecoA-transferase family2e-0960.8
NC_015312:1893945:1911063191106319122561194Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeformyl-CoA transferase5e-0959.7
NC_008595:2687245:2689097268909726902541158Mycobacterium avium 104, complete genomeL-carnitine dehydratase/bile acid-inducible protein F1e-0858.9
NC_017305:1258840:1269967126996712711061140Corynebacterium pseudotuberculosis PAT10 chromosome, completeCaiB/baiF CoA-transferase family protein3e-0857
NC_009142:2480608:2517674251767425188341161Saccharopolyspora erythraea NRRL 2338, complete genomeL-carnitine dehydratase/bile acid-inducible protein F4e-0857
NC_014329:1261480:1272608127260812737471140Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein3e-0857
NC_016781:1261300:1272428127242812735671140Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeCaiB/baiF CoA-transferase family protein3e-0857
NC_016932:1246235:1257349125734912584881140Corynebacterium pseudotuberculosis 316 chromosome, complete genomeCaiB/baiF CoA-transferase family protein3e-0857
NC_017031:1261289:1272419127241912735581140Corynebacterium pseudotuberculosis P54B96 chromosome, completeCaiB/baiF CoA-transferase family protein3e-0857
NC_017300:1258861:1269989126998912711281140Corynebacterium pseudotuberculosis 1002 chromosome, completeCaiB/baiF CoA-transferase family protein3e-0857
NC_017301:1261167:1272295127229512734341140Corynebacterium pseudotuberculosis C231 chromosome, completeCaiB/baiF CoA-transferase family protein3e-0857
NC_017303:1261311:1272439127243912735781140Corynebacterium pseudotuberculosis I19 chromosome, complete genomeCaiB/baiF CoA-transferase family protein3e-0857
NC_019673:1420198:1445869144586914470441176Saccharothrix espanaensis DSM 44229 complete genomeformyl-CoA transferase4e-0856.6
NC_007336:66000:6779867798689581161Ralstonia eutropha JMP134 megaplasmid, complete sequenceL-carnitine dehydratase/bile acid-inducible protein F6e-0752.8