Pre_GI: BLASTP Hits

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Query: NC_010067:191190:206516 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 206516, End: 206788, Length: 273

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011741:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-31132
CU928160:4570498:458745845874584587730273Escherichia coli IAI1 chromosome, complete genomehypothetical protein, putative membrane protein5e-31132
NC_011094:2791719:280939728093972809669273Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-27119
NC_011149:1987291:200770120077012007976276Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-0960.5
NC_008253:1938975:195851519585151958790276Escherichia coli 536, complete genomehypothetical protein2e-0857.8
NC_011745:2209288:225713422571342257439306Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-0857.4
NC_004547:1873390:190515419051541905429276Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-0753.5
NC_016831:947281:970040970040970303264Salmonella enterica subsp. enterica serovar Gallinarum/pullorummembrane protein2e-0651.6
NC_011294:2053991:207310820731082073371264Salmonella enterica subsp. enterica serovar Enteritidis strmembrane protein2e-0651.6
NC_011274:2044000:206423520642352064528294Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-0651.2