Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:1702350:1703262 Clostridium phytofermentans ISDg, complete genome

Start: 1703262, End: 1703882, Length: 621

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015737:1441086:145719314571931457834642Clostridium sp. SY8519, complete genometranscriptional regulator2e-21102
NC_009706:2925000:293888829388882939439552Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator7e-1890.5
NC_011837:2856500:287036328703632870941579Clostridium kluyveri NBRC 12016, complete genomehypothetical protein9e-1890.1
NC_015172:1195782:120306212030621203688627Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family1e-1583.2
NC_014169:2353711:237337023733702373939570Bifidobacterium longum subsp. longum JDM301 chromosome, completeTetR family transcriptional regulator1e-1582.8
NC_004193:375416:664955664955665572618Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator5e-1580.9
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome4e-1477.8
NC_016048:2907702:298652729865272987111585Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator1e-1170.1
NC_015759:726612:745904745904746485582Weissella koreensis KACC 15510 chromosome, complete genomeTetR family transcriptional regulator2e-1169.3
NC_004461:73390:913299132991874546Staphylococcus epidermidis ATCC 12228, complete genometranscriptional regulator tetR-family1e-1066.2
NC_004722:4496000:451605545160554516672618Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, TetR family6e-1064.3
NC_003909:4333097:435421743542174354834618Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family8e-1063.9
NC_006274:4408734:442549344254934426110618Bacillus cereus E33L, complete genometranscriptional regulator, TetR family9e-1063.5
NC_011772:4487378:450169645016964502313618Bacillus cereus G9842, complete genometranscriptional regulator, TetR family1e-0963.2
NC_014334:99000:118851118851119456606Lactobacillus casei str. Zhang chromosome, complete genomeputative transcriptional regulator1e-0962.8
NC_015690:1186545:126198612619861262594609Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator TetR8e-0960.5
NC_017347:2724313:274572327457232746310588Staphylococcus aureus subsp. aureus T0131 chromosome, completeDNA-binding protein1e-0859.7
NC_014976:2735423:276082227608222761367546Bacillus subtilis BSn5 chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_014393:4352216:437911843791184379702585Clostridium cellulovorans 743B chromosome, complete genomeregulatory protein TetR3e-0755.5
NC_016047:637778:649228649228649773546Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeTetR family transcriptional regulator3e-0755.1
NC_017195:2498113:250271925027192503264546Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, TetR family, putative3e-0755.1
NC_010376:1433247:147751714775171478062546Finegoldia magna ATCC 29328, complete genomeTetR/AcrR family transcriptional regulator5e-0754.3
NC_016641:5671186:567788656778865678542657Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator2e-0652.8
NC_013406:3975512:399704839970483997596549Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_014622:3955851:397374539737453974257513Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator5e-0651.2
NC_016935:3819500:384780138478013848349549Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator8e-0650.4