Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:1702350:1699084 Clostridium phytofermentans ISDg, complete genome

Start: 1699084, End: 1702356, Length: 3273

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014833:3161257:3180417318041731838213405Ruminococcus albus 7 chromosome, complete genomehypothetical protein0672
NC_015275:53871:7298172981761963216Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF2144e-143509
NC_014833:2855543:2871813287181328739452133Ruminococcus albus 7 chromosome, complete genomehypothetical protein2e-101371
NC_010376:1433247:1473349147334914767023354Finegoldia magna ATCC 29328, complete genomeABC transporter permease protein2e-100367
NC_014393:4988127:4988127498812749906132487Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein3e-82307
NC_014169:2353711:2368753236875323725143762Bifidobacterium longum subsp. longum JDM301 chromosome, completehypothetical protein2e-79298
NC_014638:183115:1831151831151865343420Bifidobacterium bifidum PRL2010 chromosome, complete genomeABC transporter permease1e-74282
NC_014616:213118:2131182131182165373420Bifidobacterium bifidum S17 chromosome, complete genomeABC transporter permease3e-74280
NC_007907:1547539:1562689156268915650642376Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-61238
NC_004350:1252500:1288285128828512906272343Streptococcus mutans UA159, complete genomeconserved hypothetical protein; possible permease6e-40167
NC_015172:2986867:2986867298686729892422376Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeprotein of unknown function DUF2144e-37157
NC_007907:5428247:5460345546034554627172373Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-37156
NC_011134:1951682:1970831197083119731162286Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeABC transporter permease protein2e-34149
NC_014150:1902241:1921522192152219238432322Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF2141e-25119
NC_011060:1334836:1338054133805413404172364Pelodictyon phaeoclathratiforme BU-1, complete genomeprotein of unknown function DUF2144e-24114
NC_007348:1903937:1912982191298219153482367Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF2143e-23111
NC_009485:3579323:3583610358361035860122403Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein6e-1687
NC_014833:1045180:105227110522711052963693Ruminococcus albus 7 chromosome, complete genomeABC transporter permease2e-1585.1
NC_018750:3141196:3148639314863931511702532Streptomyces venezuelae ATCC 10712, complete genomeputative ABC transporter integral membrane protein2e-0862.8
NC_015574:2221220:2238316223831622394791164Methanobacterium sp. SWAN-1 chromosome, complete genomehypothetical protein1e-0759.7
NC_006582:755294:7747607747607772222463Bacillus clausii KSM-K16, complete genomeantimicrobial peptide ABC transporter permease1e-0656.2