Pre_GI: BLASTP Hits

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Query: NC_009831:3612206:3612206 Shewanella sediminis HAW-EB3, complete genome

Start: 3612206, End: 3613489, Length: 1284

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014002:80967:8842188421897401320Methanohalophilus mahii DSM 5219 chromosome, complete genomepolysaccharide biosynthesis protein7e-43175
NC_005823:2566588:2579934257993425812771344Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130polysaccharide biosynthesis export protein9e-40164
NC_010475:2537500:2546615254661525479521338Synechococcus sp. PCC 7002, complete genomepolysaccharide biosynthesis export protein1e-38161
NC_007514:904565:9374489374489387281281Chlorobium chlorochromatii CaD3, complete genomeprobable polysaccharide biosynthesis protein6e-37155
NC_008781:3365468:3386777338677733881171341Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide biosynthesis protein4e-35149
NC_014836:2723060:2740201274020127415531353Desulfurispirillum indicum S5 chromosome, complete genomepolysaccharide biosynthesis protein2e-32140
NC_016112:57641:6697366973683101338Methylomicrobium alcaliphilum chromosome, complete genomepolysaccharide biosynthesis protein4e-32139
NC_010814:2074266:2081908208190820832631356Geobacter lovleyi SZ, complete genomepolysaccharide biosynthesis protein6e-31135
NC_012918:3009211:3034399303439930357451347Geobacter sp. M21 chromosome, complete genomepolysaccharide biosynthesis protein3e-28126
NC_008610:944985:9623289623289636561329Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),polysaccharide biosynthesis protein2e-1377.4
NC_008800:3330944:3352027335202733533161290Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-1376.3
NC_003901:2479613:2511149251114925126091461Methanosarcina mazei Go1, complete genomeheteropolysaccharide repeat-containing protein3e-1273.6
NC_012883:1817358:1832789183278918342101422Thermococcus sibiricus MM 739, complete genomeLipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)5e-1066.2
NC_018876:703633:7119837119837134131431Methanolobus psychrophilus R15 chromosome, complete genomepolysaccharide biosynthesis protein6e-1065.9
NC_007955:742834:7534247534247548601437Methanococcoides burtonii DSM 6242, complete genomepolysaccharide biosynthesis protein1e-0861.2
NC_016602:103878:1354941354941367261233Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceO-antigen flippase6e-0859.3
NC_000961:372000:3822633822633835611299Pyrococcus horikoshii OT3, complete genomelipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)1e-0654.7
NC_006624:1494424:1502593150259315038401248Thermococcus kodakarensis KOD1, complete genomecapsular polysaccharide biosynthesis protein2e-0654.3
NC_000917:532500:5359265359265373741449Archaeoglobus fulgidus DSM 4304, complete genomepolysaccharide biosynthesis protein, putative4e-0653.1
NC_011529:1722829:1730948173094817323721425Thermococcus onnurineus NA1, complete genomehypothetical lipopolysaccharide O-side chain biosynthesis protein4e-0653.1