Pre_GI: BLASTP Hits

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Query: NC_009806:35990:58616 Kineococcus radiotolerans SRS30216 plasmid pKRAD01, complete

Start: 58616, End: 59122, Length: 507

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous.Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery.This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009806:35990:377853778538117333Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completeregulatory protein ArsR2e-27121
NC_014815:5888934:589196558919655892291327Micromonospora sp. L5 chromosome, complete genomeregulatory protein arsr3e-24111
NC_009342:135500:161985161985162350366Corynebacterium glutamicum R chromosome, complete genomehypothetical protein8e-2199.8
NC_014151:370882:381083381083381442360Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, ArsR family2e-2098.2
NC_012803:2195808:223086622308662231225360Micrococcus luteus NCTC 2665, complete genometranscriptional regulator, ArsR family1e-1995.9
NC_014218:1689002:169370116937011694090390Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometranscriptional regulator, ArsR family1e-1995.5
NC_015671:255808:268822268822269181360Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein ArsR3e-1994.4
NC_014210:618500:642426642426642764339Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, ArsR family6e-1993.2
NC_012704:1701805:170536517053651705724360Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, ArsR family6e-1993.2
NC_013174:815155:834757834757835116360Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, ArsR family4e-1890.5
NC_013172:2556517:256982725698272570186360Brachybacterium faecium DSM 4810, complete genometranscriptional regulator, ArsR family1e-1789.4
NC_009342:135500:156396156396156719324Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-1788.6
NC_010617:774914:793505793505793864360Kocuria rhizophila DC2201, complete genometranscription regulator ArsR2e-1788.2
NC_017904:3113000:311302131130213113350330Mycobacterium sp. MOTT36Y chromosome, complete genomeArsR family transcriptional regulator5e-1787
NC_017955:1611037:161611416161141616434321Modestobacter marinus, complete genomeArsR family transcriptional regulator7e-1373.2
NC_017079:2634623:265163326516332651965333Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ArsR family transcriptional regulator3e-1064.3
NC_017955:1611037:162999416299941630395402Modestobacter marinus, complete genomeArsR family transcriptional regulator8e-0959.7
NC_007333:1743890:180610118061011806532432Thermobifida fusca YX, complete genomeregulatory protein, ArsR2e-0858.9
NC_014151:449732:451144451144451509366Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, ArsR family4e-0857.4
NC_013441:2788806:278842627884262788809384Gordonia bronchialis DSM 43247, complete genomeregulatory protein ArsR6e-0857
NC_009338:3029507:302909430290943029510417Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR6e-0856.6
NC_018524:5066720:507672650767265077079354Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory , arsR family protein2e-0755.1
NC_015312:1371530:137706013770601377422363Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein ArsR3e-0754.7
NC_014814:2588628:260614626061462606535390Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, ArsR family3e-0754.3
NC_009338:3359500:335994733599473360336390Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR3e-0754.3
NC_009338:630130:629744629744630133390Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR3e-0754.3
NC_016935:2503071:251799925179992518343345Paenibacillus mucilaginosus 3016 chromosome, complete genomeArsR family transcriptional regulator4e-0753.9
NC_015690:1967244:198678219867821987126345Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsR family transcriptional regulator4e-0753.9
NC_008726:3858209:387404838740483874452405Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR1e-0652.4
NC_013850:3340882:334741333474133348126714Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, ArsR family1e-0652.4
NC_014831:1906691:193494319349431935332390Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, ArsR family2e-0652
NC_008726:3858209:387031738703173870601285Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR2e-0652
NC_011283:3379181:338722933872293387942714Klebsiella pneumoniae 342 chromosome, complete genomeArsR family transcriptional regulator2e-0652
NC_015671:255808:282623282623283012390Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein ArsR2e-0651.6
NC_013947:5682895:570717957071795707568390Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TrmB3e-0651.2
NC_015723:2550000:256454325645432565232690Cupriavidus necator N-1 chromosome 2, complete sequenceArsR family transcriptional regulator4e-0650.8
NC_011083:4547825:460557146055714606257687Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, ArsR family5e-0650.4
CU928145:4950723:497268649726864973372687Escherichia coli 55989 chromosome, complete genomeputative bacterial regulatory protein of the arsR family5e-0650.4
NC_011749:34056:454384543846124687Escherichia coli UMN026 plasmid p1ESCUM, complete sequenceArsR family regulatory protein5e-0650.4
NC_011748:4950723:497268649726864973372687Escherichia coli 55989, complete genomeArsR family regulatory protein5e-0650.4
NC_016860:4055117:406497440649744065660687Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-0650.4
NC_015671:255808:295669295669296085417Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein ArsR6e-0650.1
NC_013365:92973:953299532996015687Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeputative transcriptional regulator, ars-R family6e-0650.1
NC_003384:157158:179823179823180509687Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative transcriptional regulator6e-0650.1
NC_009921:1813500:183793918379391838367429Frankia sp. EAN1pec, complete genometranscriptional regulator, ArsR family6e-0650.1
NC_015730:3853065:386067438606743861357684Roseobacter litoralis Och 149 chromosome, complete genomeputative HTH-type ArsR family transcriptional regulator6e-0650.1
NC_016887:1680338:169785716978571698207351Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator7e-0650.1