Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:2995958:3014299 Escherichia coli HS, complete genome

Start: 3014299, End: 3014493, Length: 195

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:906957:924530924530924724195Escherichia coli ATCC 8739, complete genomehypothetical protein7e-23105
NC_013008:3761467:377752837775283777788261Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein9e-2199
NC_002695:3702344:371840537184053718665261Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-2199
NC_002655:3769643:378570537857053785965261Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-2199
NC_011353:3805819:382280238228023823011210Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-2098.2
NC_000913:2975659:299377029937702994042273Escherichia coli K12, complete genomehypothetical protein6e-2095.9
AC_000091:2976293:299440429944042994676273Escherichia coli W3110 DNA, complete genome6e-2095.9
NC_011751:3285646:330218333021833302953771Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-1994