Pre_GI: BLASTP Hits

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Query: NC_009800:2651730:2660524 Escherichia coli HS, complete genome

Start: 2660524, End: 2661318, Length: 795

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:3690308:372791137279113728705795Enterobacteriaceae bacterium strain FGI 57, complete genomeP-type conjugative transfer protein TrbJ3e-113407
NC_006350:3865584:387917138791713879950780Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid conjugal transfer protein5e-69261
NC_011000:183928:194371194371195144774Burkholderia cenocepacia J2315 chromosome 1, complete sequenceconjugal transfer protein TrbJ3e-68258
NC_013722:1816561:185838418583841859157774Xanthomonas albilineans, complete genomeputative conjugal transfer protein2e-67255
NC_016745:2028424:204472320447232045472750Oceanimonas sp. GK1 chromosome, complete genomeconjugal transfer protein TrbJ5e-63241
NC_016602:2854107:286975128697512870539789Vibrio furnissii NCTC 11218 chromosome 1, complete sequencemating pair formation protein2e-60232
NC_008463:1293079:131329113132911314076786Pseudomonas aeruginosa UCBPP-PA14, complete genomemating pair formation protein TrbJ3e-60231
NC_008800:1300500:131858813185881319367780Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,conjugal transfer protein TrbJ2e-59229
NC_008344:2374761:238273423827342383513780Nitrosomonas eutropha C91, complete genomeputative mating pair formation protein5e-59227
NC_004741:2593012:260828226082822609061780Shigella flexneri 2a str. 2457T, complete genomeputative mating pair formation protein5e-59227
NC_008344:669498:681747681747682526780Nitrosomonas eutropha C91, complete genomeputative mating pair formation protein5e-59227
NC_013456:3011518:302554130255413026311771Vibrio sp. Ex25 chromosome 1, complete genomeconjugative transfer protein TrbJ1e-57223