Pre_GI: BLASTP Hits

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Query: NC_009708:915814:917099 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 917099, End: 917800, Length: 702

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:443398:459588459588460292705Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein9e-97352
NC_016816:1137904:115333711533371154041705Pantoea ananatis LMG 5342, complete genometranscriptional regulator1e-96352
NC_011415:308825:322797322797323501705Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-96350
NC_011274:311843:316156316156316869714Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein3e-75281
NC_014618:4114004:412273941227394123437699Enterobacter cloacae SCF1 chromosome, complete genomeregulatory protein DeoR6e-64243
NC_014618:690056:720643720643721353711Enterobacter cloacae SCF1 chromosome, complete genomeregulatory protein DeoR9e-58223
NC_013592:3263005:326603132660313266717687Dickeya dadantii Ech586, complete genomeregulatory protein DeoR4e-56218
NC_000913:2746886:276772527677252768426702Escherichia coli K12, complete genomeCP4-57 prophage; predicted DNA-binding transcriptional regulator8e-56216
AC_000091:2747520:276835927683592769060702Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator8e-56216
NC_010473:2839902:285949028594902860191702Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted DNA-binding transcriptional regulator8e-56216
NC_012759:2633949:265353726535372654238702Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative DNA-binding transcriptional regulator8e-56216
NC_012917:3241196:326367232636723264370699Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeregulatory protein DeoR4e-55214
NC_013421:1505176:150592715059271506625699Pectobacterium wasabiae WPP163, complete genomeregulatory protein DeoR3e-54211
NC_020260:882307:896894896894897631738Cronobacter sakazakii Sp291, complete genomeregulatory protein DeoR2e-53209
NC_014121:3776902:378903437890343789771738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeregulatory protein DeoR2e-53209
AP010958:5272863:528559852855985286314717Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcription repressor1e-48193
NC_013353:5272863:528559852855985286314717Escherichia coli O103:H2 str. 12009, complete genometranscription repressor1e-48193
NC_011283:4966471:498746449874644988180717Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator8e-49193
NC_020418:116500:132123132123132830708Morganella morganii subsp. morganii KT, complete genomeputative transcriptional regulator3e-43174
NC_016902:4236680:424490342449034245586684Escherichia coli KO11FL chromosome, complete genomeregulatory protein DeoR8e-41167
CP002516:4236680:424490342449034245586684Escherichia coli KO11, complete genomeregulatory protein DeoR8e-41167
CP002185:4750571:476728347672834767966684Escherichia coli W, complete genomePredicted transcriptional regulator8e-41167
NC_008563:4707826:471267847126784713358681Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-40165
NC_015761:299386:318787318787319434648Salmonella bongori NCTC 12419, complete genomeprophage protein6e-40164
NC_004431:4319152:433552143355214336201681Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator yfjR8e-39160
NC_008253:4817864:483127748312774831957681Escherichia coli 536, complete genomehypothetical protein7e-39160
NC_007946:4875997:489077948907794891459681Escherichia coli UTI89, complete genomehypothetical protein7e-39160
NC_015663:1356982:137513513751351375824690Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-37154
NC_020260:603796:630428630428631126699Cronobacter sakazakii Sp291, complete genomeregulatory protein DeoR1e-36153
NC_014762:2428721:243368224336822434560879Sulfuricurvum kujiense DSM 16994 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein3e-2098.6
NC_008781:2883968:289054928905492891454906Polaromonas naphthalenivorans CJ2, complete genomeHelix-turn-helix, type 11 domain protein8e-1994
NC_008609:206313:214686214686215591906Pelobacter propionicus DSM 2379, complete genomeHelix-turn-helix, type 11 domain protein8e-1580.9
NC_016602:3122700:314620931462093147081873Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetranscriptional regulator1e-1480.1
NC_007969:1095438:109643410964341097336903Psychrobacter cryohalolentis K5, complete genometranscriptional regulator-like7e-1477.4
NC_014836:497350:513914513914514846933Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein4e-0755.1