Pre_GI: BLASTP Hits

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Query: NC_009708:4215500:4217055 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4217055, End: 4217216, Length: 162

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:4477836:449862044986204498853234Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1477.8
NC_014121:398012:422037422037422267231Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1373.9
NC_016832:4368948:438753843875384387786249Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-1165.5
NC_012125:4481808:450278045027804503049270Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-1065.5
NC_014228:3505320:351678035167803517037258Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0962
NC_014228:3391500:341204634120463412303258Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0961.6
NC_013892:1503162:150765815076581507915258Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-0961.6
NC_013892:3278647:328936232893623289619258Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-0961.6
NC_004547:590844:596810596810597064255Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-0960.5
NC_016845:2274500:228618122861812286303123Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-0651.2