Pre_GI: BLASTP Hits

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Query: NC_009708:4182460:4190571 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4190571, End: 4191458, Length: 888

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:3151458:316077631607763161594819Serratia marcescens WW4, complete genomehypothetical protein8e-36150
NC_015554:4648919:466358646635864664449864Alteromonas sp. SN2 chromosome, complete genomehypothetical protein1e-1067.4
NC_002506:370629:392515392515393372858Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein7e-0755.1
NC_016945:370471:392334392334393191858Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein7e-0754.7
NC_014330:609982:6181686181686197331566Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein1e-0653.9