Pre_GI: BLASTP Hits

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Query: NC_009708:4182460:4188747 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4188747, End: 4189121, Length: 375

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:1483000:149197014919701492344375Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-24109
NC_013892:3278647:330569233056923306066375Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-23108
NC_014228:3534378:353962035396203539994375Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-23107
NC_015566:316340:336551336551336916366Serratia sp. AS12 chromosome, complete genomehypothetical protein3e-22103
NC_009832:4521585:454975545497554550120366Serratia proteamaculans 568, complete genomehypothetical protein4e-22103
NC_014029:331919:366936366936367301366Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-22103
NC_010554:2789722:282109128210912821507417Proteus mirabilis HI4320, complete genomehypothetical protein7e-1992.4
NC_004547:611178:631033631033631395363Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-1992.4
NC_013716:3512950:353706335370633537416354Citrobacter rodentium ICC168, complete genomehypothetical protein8e-0855.8
NC_011992:1213726:123201612320161232426411Acidovorax ebreus TPSY, complete genomehypothetical protein1e-0755.5
NC_012912:483390:507769507769508167399Dickeya zeae Ech1591, complete genomehypothetical protein3e-0753.9
NC_015572:2186394:221909822190982219475378Methylomonas methanica MC09 chromosome, complete genomeconjugative transfer region protein3e-0753.9
NC_012731:600518:606213606213606566354Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-0753.1
NC_010170:1498253:153837215383721538782411Bordetella petrii, complete genomehypothetical protein8e-0752.4
NC_009138:1974935:202302920230292023439411Herminiimonas arsenicoxydans, complete genomehypothetical protein9e-0752.4
NC_008344:49039:908089080891206399Nitrosomonas eutropha C91, complete genomehypothetical protein5e-0650.1
NC_012660:2045398:210808321080832108496414Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-0649.7
NC_015379:2417312:244600024460002446395396Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-0649.7