Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:63230:84959 Kineococcus radiotolerans SRS30216, complete genome

Start: 84959, End: 85597, Length: 639

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:5627940:567427456742745674888615Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein4e-33141
NC_015957:7348269:739521373952137395821609Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-22106
NC_013730:4502965:451876945187694519392624Spirosoma linguale DSM 74, complete genomehypothetical protein8e-0857
NC_018012:1628364:163386016338601634471612Thiocystis violascens DSM 198 chromosome, complete genomeputative NADH-flavin reductase1e-0756.6
NC_007333:1411050:143347614334761434111636Thermobifida fusca YX, complete genomehypothetical protein2e-0652.8