Pre_GI: BLASTP Hits

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Query: NC_009664:533021:555196 Kineococcus radiotolerans SRS30216, complete genome

Start: 555196, End: 555546, Length: 351

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013093:2599591:260638126063812606737357Actinosynnema mirum DSM 43827, complete genomeflagellar basal-body rod protein FlgB2e-1787.8
NC_015391:2059191:209017120901712090599429Carnobacterium sp. 17-4 chromosome, complete genomeflagellar basal body rod protein FlgB6e-0959.7
NC_009253:2615777:263114426311442631542399Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar basal-body rod protein FlgB7e-0959.3
NC_014376:3732547:373626137362613736641381Clostridium saccharolyticum WM1 chromosome, complete genomeflagellar basal-body rod protein FlgB1e-0858.5
NC_015589:1240197:126671012667101267111402Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar basal-body rod protein FlgB3e-0857.4
NC_019978:625476:630589630589630993405Halobacteroides halobius DSM 5150, complete genomeflagellar basal-body rod protein FlgB6e-0752.8
NC_010718:1454087:146154214615421461946405Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar basal-body rod protein FlgB1e-0652
NC_011899:1807365:181165018116501812045396Halothermothrix orenii H 168, complete genomeflagellar basal-body rod protein FlgB2e-0651.2
NC_020291:4903981:493959649395964939994399Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar basal body rod protein FlgB9e-0648.9