Pre_GI: BLASTP Hits

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Query: NC_009664:4696961:4749751 Kineococcus radiotolerans SRS30216, complete genome

Start: 4749751, End: 4752063, Length: 2313

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016631:3245501:3266670326667032690332364Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein4e-158558
NC_009664:63230:7686076860790942235Kineococcus radiotolerans SRS30216, complete genomehypothetical protein3e-58226
NC_013729:4978401:4981204498120449832972094Kribbella flavida DSM 17836, complete genomehypothetical protein2e-54214
NC_014364:2717865:2737827273782727398482022Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein1e-24115
NC_009664:63230:6971969719717672049Kineococcus radiotolerans SRS30216, complete genomehypothetical protein2e-22108
NC_013729:4978401:4978401497840149803351935Kribbella flavida DSM 17836, complete genomehypothetical protein4e-1790.9
NC_008554:956003:9570939570939590091917Syntrophobacter fumaroxidans MPOB, complete genomeprotein of unknown function DUF1877e-0963.2
NC_014364:2717865:2740933274093327429812049Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein4e-0860.5