Pre_GI: BLASTP Hits

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Query: NC_009664:4696961:4733229 Kineococcus radiotolerans SRS30216, complete genome

Start: 4733229, End: 4735028, Length: 1800

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011832:1122268:1133735113373511355281794Candidatus Methanosphaerula palustris E1-9c, complete genomehypothetical protein2e-56221
NC_014639:3520874:3533001353300135347551755Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein8e-43175
CP002207:3520874:3533001353300135347551755Bacillus atrophaeus 1942, complete genomehypothetical protein8e-43175
NC_009939:16437:2880928809305751767Deinococcus geothermalis DSM 11300 plasmid pDGEO02, completeSir2-like deacetylase1e-38161
NC_015138:4103457:4114249411424941160961848Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-0965.1
NC_010995:764567:7696707696707715411872Cellvibrio japonicus Ueda107, complete genomehypothetical protein2e-0655.1
NC_009434:3434381:3449330344933034512011872Pseudomonas stutzeri A1501, complete genomehypothetical protein3e-0654.3
NC_020126:7686076:7694341769434176961401800Myxococcus stipitatus DSM 14675, complete genomehypothetical protein8e-0652.8