Pre_GI: BLASTP Hits

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Query: NC_009664:4696961:4697616 Kineococcus radiotolerans SRS30216, complete genome

Start: 4697616, End: 4698968, Length: 1353

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014666:5057000:505997650599765060860885Frankia sp. EuI1c chromosome, complete genomeNmrA family protein1e-33144
NC_015953:6212366:625056862505686251458891Streptomyces sp. SirexAA-E chromosome, complete genomeNmrA family protein6e-31135
NC_003888:8594500:859552885955288596418891Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-27122
NC_013730:4573077:457926045792604580114855Spirosoma linguale DSM 74, complete genomeNmrA family protein9e-2098.6
NC_016935:2567039:259818025981802599082903Paenibacillus mucilaginosus 3016 chromosome, complete genomeNmrA family protein2e-1480.5
NC_014841:248487:260841260841261275435Pantoea sp. At-9b plasmid pPAT9B04, complete sequencehypothetical protein3e-1377
NC_012483:971592:975643975643976506864Acidobacterium capsulatum ATCC 51196, complete genomeNmrA family protein2e-0963.9
NC_012522:2623172:264169226416922642255564Rhodococcus opacus B4, complete genomehypothetical protein2e-0860.8
NC_015957:7408466:741749474174947417976483Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0860.5
NC_009664:10718:130361303613986951Kineococcus radiotolerans SRS30216, complete genomeNmrA family protein2e-0653.9
NC_015186:2165628:218034521803452181223879Acidiphilium multivorum AIU301, complete genomehypothetical protein9e-0652