Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4683963 Kineococcus radiotolerans SRS30216, complete genome

Start: 4683963, End: 4684331, Length: 369

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012483:3144689:316145131614513161792342Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-32138
NC_015312:3675148:369304636930463693309264Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein7e-1785.9
NC_013929:9450747:945384894538489454111264Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1478.2
NC_008268:7180663:721486472148647215130267Rhodococcus sp. RHA1, complete genomehypothetical protein1e-1375.1
NC_010625:1513436:152722215272221527494273Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein1e-1374.7
NC_019673:9084045:909547290954729095732261Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1374.7
NC_014815:2363460:239023523902352390492258Micromonospora sp. L5 chromosome, complete genomezinc finger, ubp-type protein8e-1372.4
NC_007510:1959883:198919819891981989539342Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein6e-1269.7
NC_008536:2079052:212718221271822127445264Solibacter usitatus Ellin6076, complete genomehypothetical protein1e-1168.6
NC_019892:5368096:537255753725575372850294Singulisphaera acidiphila DSM 18658 chromosome, complete genomeZn-finger-containing protein2e-1168.2