Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4671491 Kineococcus radiotolerans SRS30216, complete genome

Start: 4671491, End: 4674259, Length: 2769

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:4660121466012146629882868Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR9e-98358
NC_009664:4696961:4699553469955347024382886Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR1e-87325
NC_009664:4423829:4655577465557746583482772Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR7e-75282
NC_008596:4104476:4124109412410941268412733Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulatory protein2e-31138
NC_003888:7866148:7881841788184178846392799Streptomyces coelicolor A3(2), complete genometranscriptional regulator6e-24113
NC_019673:3041936:305598930559893056432444Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein8e-0963.5
NC_015564:2870631:2901783290178329034231641Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeregulatory protein LuxR2e-0758.5
NC_015671:2371632:2385226238522623880992874Cellvibrio gilvus ATCC 13127 chromosome, complete genomeLuxR family transcriptional regulator8e-0756.6