Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4669153 Kineococcus radiotolerans SRS30216, complete genome

Start: 4669153, End: 4669872, Length: 720

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:8401060:842384584238458424516672Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-1066.6
NC_016582:11380000:113858191138581911386454636Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-1064.3
NC_008268:361424:370504370504371142639Rhodococcus sp. RHA1, complete genomehypothetical protein4e-0755.1
NC_011894:2385834:239102623910262391664639Methylobacterium nodulans ORS 2060, complete genomemetal dependent phosphohydrolase1e-0653.5
NC_011757:1532047:153728515372851537962678Methylobacterium chloromethanicum CM4, complete genomemetal dependent phosphohydrolase4e-0652
NC_012988:1777618:180242718024271803104678Methylobacterium extorquens DM4, complete genomemetal-dependent phosphohydrolase4e-0652
NC_016626:1825845:185585918558591856500642Burkholderia sp. YI23 plasmid byi_1p, complete sequencemetal dependent phosphohydrolase4e-0651.6