Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4660121 Kineococcus radiotolerans SRS30216, complete genome

Start: 4660121, End: 4662988, Length: 2868

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4696961:4699553469955347024382886Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR0738
NC_009664:4423829:4655577465557746583482772Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR3e-116420
NC_009664:4423829:4671491467149146742592769Kineococcus radiotolerans SRS30216, complete genomeregulatory protein LuxR2e-106387
NC_008596:4104476:4124109412410941268412733Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulatory protein9e-30132
NC_003888:7866148:7881841788184178846392799Streptomyces coelicolor A3(2), complete genometranscriptional regulator1e-22109
NC_019673:3041936:305598930559893056432444Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-0963.5
NC_013947:5682895:5684186568418656868882703Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family3e-0654.7