Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4641313 Kineococcus radiotolerans SRS30216, complete genome

Start: 4641313, End: 4641786, Length: 474

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:3316962:333384633338463334289444Frankia sp. EAN1pec, complete genomeNUDIX hydrolase2e-1891.7
NC_006361:5146000:516642151664215166888468Nocardia farcinica IFM 10152, complete genomeputative MutT family protein1e-1582
NC_007777:1018824:104178610417861042223438Frankia sp. CcI3, complete genomeNUDIX hydrolase3e-1580.9
NC_007777:3000941:300957130095713010002432Frankia sp. CcI3, complete genomeNUDIX hydrolase7e-1579.7
NC_007777:3824291:383269638326963833229534Frankia sp. CcI3, complete genomeNUDIX hydrolase1e-1375.5
NC_009380:2253500:225821622582162258653438Salinispora tropica CNB-440 chromosome, complete genomeNUDIX hydrolase7e-1373.2
NC_012589:842270:856945856945857379435Sulfolobus islandicus L.S.2.15, complete genomeNUDIX hydrolase3e-1270.9
NC_007333:1559321:157359815735981573954357Thermobifida fusca YX, complete genomeputative MutT-family protein3e-1270.9
NC_016111:4207110:421322942132294213759531Streptomyces cattleya NRRL 8057, complete genomeMutT-family protein2e-1065.1
NC_016887:2269177:228193322819332282316384Nocardia cyriacigeorgica GUH-2, complete genomeNUDIX hydrolase3e-1064.3
NC_014210:3170537:317483631748363175384549Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,NUDIX hydrolase2e-0961.6
NC_013929:5431954:544367154436715444177507Streptomyces scabiei 87.22 chromosome, complete genomeNUDIX hydrolase1e-0755.8
NC_003155:320979:322432322432322938507Streptomyces avermitilis MA-4680, complete genomeMutT-family protein1e-0755.5
NC_018750:5293829:530525453052545305784531Streptomyces venezuelae ATCC 10712, complete genomeMutT-family protein2e-0755.1
NC_018524:557666:574160574160574444285Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemutT-family domain protein8e-0752.8