Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4638240 Kineococcus radiotolerans SRS30216, complete genome

Start: 4638240, End: 4639238, Length: 999

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011725:2949519:296992629699262970804879Bacillus cereus B4264 chromosome, complete genomeaminoglycoside phosphotransferase2e-61236
NC_013406:4023367:404309140430914043975885Paenibacillus sp. Y412MC10 chromosome, complete genomeaminoglycoside phosphotransferase2e-53209
NC_013947:5682895:568698556869855687896912Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeaminoglycoside phosphotransferase6e-50198
NC_009921:4903688:4912028491202849130471020Frankia sp. EAN1pec, complete genomeaminoglycoside phosphotransferase3e-48192
NC_015588:95697:110913110913111833921Isoptericola variabilis 225 chromosome, complete genomeaminoglycoside phosphotransferase6e-32138
NC_020211:2123819:213929821392982140197900Serratia marcescens WW4, complete genomephosphotransferase3e-31135
NC_016582:11672500:116793661167936611680262897Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-21101
NC_010793:541040:558731558731559207477Orientia tsutsugamushi str. Ikeda, complete genomeaminoglycoside phosphotransferase2e-1687
NC_012522:3867167:389549838954983896415918Rhodococcus opacus B4, complete genomehypothetical protein2e-1583.2
NC_010572:1748668:176829017682901769207918Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phosphotransferase1e-1067.8
NC_014210:1625954:163049216304921631409918Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,aminoglycoside phosphotransferase2e-1067
NC_013595:3541012:354813635481363549038903Streptosporangium roseum DSM 43021, complete genomehypothetical protein5e-0962.4
NC_013093:3068486:3110811311081131133272517Actinosynnema mirum DSM 43827, complete genomeNB-ARC domain protein4e-0652.8